Home › Research notes

Experimental design

Are we measuring drought, or plant size?

In many pot experiments, drought is imposed by saturating the soil and then withholding water for a fixed number of days, often 7 to 10, before measuring. The hidden assumption is that every plant has then experienced the same stress. It probably has not. A larger plant transpires more and dries its pot faster than a smaller one, so on the same day the large plant may sit at a much lower soil water content. Where size differs between genotypes, treatments or even pots, “days without water” measures a mixture of drought intensity and plant size.

This matters for interpretation. A genotype that looks more sensitive may simply be larger and so be exposed to more severe stress, while a small, slow-growing genotype may look tolerant because its soil stayed wetter. Rankings of tolerance, and association studies built on them, can inherit that confound.

What I would do instead:

This is an argument from basic water-balance reasoning, not a measured result. How large the effect is will depend on species, pot volume, evaporative demand, and the range of plant sizes, so it should be quantified in each system and not assumed.

Related reading: Ray JD, Sinclair TR (1997) Stomatal closure of maize hybrids in response to drying soil. Crop Science 37: 803–807 (doi:10.2135/cropsci1997.0011183x003700030018x); Passioura JB (2006) The perils of pot experiments. Functional Plant Biology 33: 1075–1079 (doi:10.1071/fp06223).

This is a short, dated note by Dr. Md. Mezanur Rahman. Notes are working ideas and arguments, not peer-reviewed results, and each says what would test it. See all research notes or the home page.